rsa-tools - menu

RSAT
NeAT

Regulatory Sequence Analysis Tools

Most popular tools

retrieve sequence retrieve EnsEMBL sequence New! oligo-analysis (words) matrix-scan (matrices) random sequence

> view all tools

Genomes and genes

supported organisms gene information infer operons get orthologs random gene selection

Sequence retrieval

retrieve sequence retrieve EnsEMBL sequence New! purge sequence convert sequence random sequences

Pattern discovery

strings oligo-analysis (words) oligo-diff (words) New! dyad-analysis (spaced pairs) footprint-discovery position-analysis (words) ORM (word windows) pattern assembly matrices info-gibbs New ! consensus

Pattern matching

strings dna-pattern genome-scale dna-pattern matrices matrix-scan patser genome-scale patser matrix distrib

Comparative genomics

get orthologs footprint-discovery

New!

Build control sets

random gene selection random sequence random-motif New ! random-sites New ! implant-sites New !

Conversion/Utilities

sequences convert sequence matrices convert matrix background models New ! convert background sequence probability features convert features compare features

Drawing

feature map XY graph

Web services

Introduction Documentation WSDL Clients New ! Taverna workflows

Doc and help

Map of the tools Introduction Tutorials Course Contact & Forum

Information

People Publications Distribution Credits Data Links

Jacques van Helden